Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PQ455_03170 | P48027 | + | 672320 - 675538 | 113965.0 |
| diguanylate cyclase | PQ455_03175 | Q9A5I5 | + | 675535 - 676413 | 31679.3 |
| aldo/keto reductase | PQ455_03180 | A2XRZ0 | + | 676554 - 677543 | 35419.6 |
| cysteine hydrolase | PQ455_03185 | B1M6B8 | - | 677595 - 678194 | 21102.2 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | PQ455_03190 | P77489 | - | 678217 - 680424 | 78396.4 |
| xanthine dehydrogenase family protein subunit m | PQ455_03195 | P77324 | - | 680421 - 681374 | 33458.3 |
| aldehyde dehydrogenase iron-sulfur subunit | PQ455_03200 | Q8X6I9 | - | 681371 - 682009 | 22194.7 |
| cupin domain-containing protein | PQ455_03205 | Not Available | - | 682265 - 682723 | 15622.3 |
| duf2155 domain-containing protein | PQ455_03210 | P20370 | - | 682760 - 683338 | 20534.6 |
| lysr family transcriptional regulator | PQ455_03215 | Q01610 | + | 683552 - 684445 | 32904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.