Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmh | PQ455_03070 | P45406 | + | 651785 - 652189 | 14298.5 |
| cytochrome c biogenesis protein | PQ455_03075 | P45399 | + | 652186 - 652815 | 22382.1 |
| is630 family transposase | PQ455_03080 | Not Available | + | 652911 - 653859 | 35336.6 |
| gfa family protein | PQ455_03085 | E1VBT6 | - | 653872 - 654291 | 14545.4 |
| phosphoribosylformylglycinamidine synthase subunit purq | PQ455_03090 | Q1GVL0 | - | 654309 - 654977 | 23368.0 |
| phosphoribosylformylglycinamidine synthase subunit purs | PQ455_03095 | Q55842 | - | 654974 - 655210 | 8474.29 |
| had family hydrolase | PQ455_03100 | Not Available | + | 655324 - 656028 | 25557.7 |
| glutathione s-transferase family protein | PQ455_03105 | Q96266 | - | 656189 - 656848 | 23897.7 |
| hypothetical protein | PQ455_03110 | Not Available | - | 656928 - 657275 | 12550.0 |
| rna methyltransferase | PQ455_03115 | P74261 | - | 657346 - 658143 | 28800.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.