Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | PQ455_03020 | A5V3Z0 | - | 643883 - 644650 | 27467.8 |
| serine--trna ligase | PQ455_03025 | Q2GA28 | - | 644650 - 645924 | 45974.8 |
| host attachment family protein | PQ455_03030 | Not Available | + | 646026 - 646469 | 16467.3 |
| hypothetical protein | PQ455_03035 | Not Available | + | 646583 - 647170 | 18841.5 |
| rna polymerase-binding protein dksa | PQ455_03040 | P0CAU3 | + | 647341 - 647802 | 17445.4 |
| heme abc transporter permease ccmc | PQ455_03045 | P30962 | + | 647960 - 648673 | 25662.0 |
| hypothetical protein | PQ455_03050 | Not Available | + | 648670 - 648807 | 4892.01 |
| cytochrome c maturation protein ccme | PQ455_03055 | Q5NN30 | + | 648917 - 649360 | 15871.2 |
| heme lyase ccmf/nrfe family subunit | PQ455_03060 | P45403 | + | 649357 - 651264 | 67710.9 |
| dsbe family thiol:disulfide interchange protein | PQ455_03065 | P30960 | + | 651255 - 651788 | 18460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.