Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_02970 | Not Available | + | 625737 - 626198 | 15813.0 |
| duf2059 domain-containing protein | PQ455_02975 | Not Available | + | 626209 - 626931 | 25411.5 |
| hypothetical protein | PQ455_02980 | Not Available | + | 626942 - 627238 | 10840.0 |
| hypothetical protein | PQ455_02985 | Not Available | + | 627235 - 627711 | 17603.2 |
| glutamate synthase large subunit | PQ455_02990 | Q05755 | + | 627708 - 632237 | 164282.0 |
| hypothetical protein | PQ455_02995 | Not Available | + | 632384 - 632914 | 19685.4 |
| dna-directed rna polymerase subunit beta | PQ455_03000 | A5VBZ8 | + | 633497 - 637648 | 153097.0 |
| dna-directed rna polymerase subunit beta' | PQ455_03005 | A5VBZ7 | + | 637818 - 642098 | 157326.0 |
| hypothetical protein | PQ455_03010 | Not Available | - | 642340 - 642639 | 10656.8 |
| m23 family metallopeptidase | PQ455_03015 | A0A0H3C9Q9 | - | 642798 - 643886 | 38312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.