Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | PQ455_02620 | Q4R4Z9 | + | 535738 - 537375 | 58795.2 |
| aldehyde dehydrogenase family protein | PQ455_02625 | O34660 | + | 537416 - 538819 | 49589.5 |
| fmn-dependent l-lactate dehydrogenase lldd | PQ455_02630 | B0T7X2 | + | 538830 - 539990 | 41273.3 |
| tonb-dependent receptor | PQ455_02635 | Q93SE0 | + | 540121 - 542994 | 101963.0 |
| hypothetical protein | PQ455_02640 | Not Available | + | 543074 - 544162 | 39197.0 |
| glycerate kinase | PQ455_02645 | Q44472 | + | 544385 - 545716 | 46102.1 |
| iclr family transcriptional regulator | PQ455_02650 | P16528 | + | 545891 - 546688 | 28859.0 |
| phenylacetate--coa ligase | PQ455_02655 | Q9L9C1 | + | 546969 - 548255 | 47146.0 |
| duf1593 domain-containing protein | PQ455_02660 | Not Available | + | 548340 - 549857 | 53808.0 |
| fadr/gntr family transcriptional regulator | PQ455_02665 | O07007 | + | 549921 - 550694 | 27938.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.