Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like cysteine peptidase | PQ455_02470 | Not Available | - | 499828 - 500472 | 23215.0 |
| polysaccharide export protein | PQ455_02475 | Q02728 | - | 500694 - 501263 | 20107.2 |
| metallophosphoesterase family protein | PQ455_02480 | Q5L1R3 | + | 501366 - 502121 | 27220.9 |
| hypothetical protein | PQ455_02485 | Not Available | - | 502278 - 503141 | 25694.3 |
| outer membrane beta-barrel protein | PQ455_02490 | Not Available | + | 503279 - 504604 | 48636.6 |
| polysaccharide biosynthesis tyrosine autokinase | PQ455_02495 | P33698 | + | 504649 - 506850 | 79300.9 |
| hypothetical protein | PQ455_02500 | Not Available | + | 507282 - 507626 | 12613.2 |
| o-antigen ligase family protein | PQ455_02505 | Not Available | + | 507623 - 509056 | 51203.1 |
| hypothetical protein | PQ455_02510 | Not Available | - | 509117 - 509314 | 6805.39 |
| mfs transporter | PQ455_02515 | P77389 | - | 509369 - 510547 | 39556.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.