Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PQ455_02420 | P75796 | + | 488630 - 490192 | 53647.4 |
| deoxyribodipyrimidine photo-lyase | PQ455_02425 | A9CJC9 | + | 490189 - 491559 | 50853.4 |
| sugar transporter | PQ455_02430 | Not Available | + | 491723 - 492157 | 15616.8 |
| glycerophosphodiester phosphodiesterase | PQ455_02435 | Q9SD81 | + | 492181 - 493242 | 37734.1 |
| nad-dependent dna ligase liga | PQ455_02440 | A5VFJ8 | + | 493253 - 495352 | 75863.3 |
| peptide mfs transporter | PQ455_02445 | P94408 | + | 495471 - 497054 | 56537.8 |
| phosphoglucosamine mutase | PQ455_02450 | A5V2D8 | + | 497125 - 498462 | 46913.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | PQ455_02455 | P56904 | + | 498459 - 499250 | 25835.5 |
| hypothetical protein | PQ455_02460 | Not Available | + | 499347 - 499490 | 4988.3 |
| hypothetical protein | PQ455_02465 | Not Available | - | 499495 - 499686 | 6945.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.