Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PQ455_02370 | Q8X625 | + | 476093 - 477295 | 41291.6 |
| duf1993 domain-containing protein | PQ455_02375 | Not Available | - | 477303 - 477809 | 17909.4 |
| atp-dependent clp protease adapter clps | PQ455_02380 | Q5NLR1 | + | 477981 - 478337 | 13211.9 |
| hypothetical protein | PQ455_02385 | Not Available | - | 478461 - 478637 | 5818.35 |
| autotransporter assembly complex protein tama | PQ455_02390 | D2TN56 | + | 478756 - 480741 | 70003.7 |
| translocation/assembly module tamb domain-containing protein | PQ455_02395 | E1WAU5 | + | 480741 - 484889 | 144309.0 |
| hypothetical protein | PQ455_02400 | Not Available | - | 484953 - 485237 | 10277.9 |
| multidrug effflux mfs transporter | PQ455_02405 | P28246 | - | 485363 - 486616 | 44521.5 |
| abc transporter permease subunit | PQ455_02410 | P45054 | + | 486943 - 487857 | 31702.8 |
| abc transporter permease subunit | PQ455_02415 | P0AFH7 | + | 487854 - 488633 | 27095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.