Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | PQ455_02220 | P0DPR6 | + | 440805 - 441968 | 41212.0 |
| mdr family mfs transporter | PQ455_02225 | P0DPR7 | + | 441972 - 443540 | 55113.6 |
| efflux transporter outer membrane subunit | PQ455_02230 | O31101 | + | 443540 - 445000 | 50797.1 |
| anti-sigma factor | PQ455_02235 | Not Available | - | 445122 - 445814 | 23400.4 |
| sigma-70 family rna polymerase sigma factor | PQ455_02240 | A3Q5U0 | - | 445807 - 446352 | 19751.7 |
| peroxiredoxin | PQ455_02245 | P9WID8 | - | 446451 - 446981 | 18644.6 |
| hypothetical protein | PQ455_02250 | Not Available | + | 447326 - 448927 | 54558.3 |
| tonb-dependent receptor | PQ455_02255 | Q1CBU1 | + | 449010 - 451757 | 98475.4 |
| dihydrolipoyl dehydrogenase | PQ455_02260 | P31046 | - | 452030 - 453427 | 48121.2 |
| giy-yig nuclease family protein | PQ455_02265 | A4SIJ4 | - | 453522 - 453785 | 10358.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.