Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | PQ455_02020 | Not Available | - | 402377 - 403138 | 26109.6 |
| fur family transcriptional regulator | PQ455_02025 | P0AC51 | - | 403358 - 403825 | 16595.7 |
| histidine kinase dimerization/phosphoacceptor domain -containing protein | PQ455_02030 | P9WGL4 | + | 403895 - 404902 | 35952.0 |
| Tmrna,resume consensus sequence (at 200): cacaagtgccaacgataa | Not Available | Not Available | + | 405050 - 405382 | Not Available |
| large conductance mechanosensitive channel protein mscl | PQ455_02040 | Q2G9Z8 | - | 405416 - 405859 | 15702.5 |
| lema family protein | PQ455_02045 | A8AVK0 | + | 406027 - 406620 | 21198.1 |
| tpm domain-containing protein | PQ455_02050 | P55140 | + | 406738 - 407619 | 30295.4 |
| hypothetical protein | PQ455_02055 | Not Available | + | 407621 - 408286 | 23884.0 |
| nudix hydrolase | PQ455_02060 | Q8KP10 | + | 408343 - 408852 | 18128.0 |
| polyprenyl synthetase family protein | PQ455_02065 | P0AD57 | - | 408971 - 409993 | 36857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.