Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_01970 | Not Available | - | 392815 - 393486 | 23594.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PQ455_01975 | A5VDD4 | - | 393483 - 394448 | 34280.6 |
| division/cell wall cluster transcriptional repressor mraz | PQ455_01980 | Q9ZCY1 | - | 394445 - 394963 | 18948.7 |
| hypothetical protein | PQ455_01985 | Not Available | - | 395272 - 395544 | 9138.14 |
| duf6481 family protein | PQ455_01990 | Not Available | - | 395692 - 396012 | 11392.6 |
| spermidine synthase | PQ455_01995 | Q7TY95 | + | 396158 - 396976 | 29037.8 |
| fkbm family methyltransferase | PQ455_02000 | D4GYG5 | + | 397202 - 398245 | 38905.0 |
| peptide-methionine (r)-s-oxide reductase msrb | PQ455_02005 | Q6ADJ8 | + | 398402 - 398872 | 16602.8 |
| deoxyguanosinetriphosphate triphosphohydrolase | PQ455_02010 | Q9RNN5 | - | 398979 - 400148 | 42622.2 |
| spor domain-containing protein | PQ455_02015 | Not Available | - | 400258 - 402297 | 70232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.