Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | PQ455_01820 | Q1RI82 | - | 350352 - 353819 | 126563.0 |
| succinate dehydrogenase assembly factor 2 | PQ455_01825 | C7JGP5 | - | 353924 - 354190 | 10641.6 |
| atp-dependent dna helicase recg | PQ455_01830 | Q8XD86 | + | 354424 - 356484 | 73808.5 |
| glucan biosynthesis protein g | PQ455_01835 | Q89BU4 | + | 356499 - 357998 | 54267.4 |
| glucans biosynthesis glucosyltransferase mdoh | PQ455_01840 | Q9A6R5 | + | 357995 - 359926 | 70636.6 |
| duf3857 domain-containing protein | PQ455_01845 | Not Available | + | 359965 - 361908 | 70694.4 |
| tetratricopeptide repeat protein | PQ455_01850 | Not Available | + | 361985 - 365263 | 117662.0 |
| hypothetical protein | PQ455_01855 | Not Available | - | 365267 - 365437 | 5917.39 |
| Trna-leu | Not Available | Not Available | + | 365545 - 365629 | Not Available |
| trigger factor | PQ455_01865 | A5V3U6 | + | 365706 - 367304 | 58098.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.