Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_20855 | Not Available | - | 49148 - 49972 | 30259.5 |
| hypothetical protein | PQ455_20865 | Q05308 | + | 188 - 1471 | 46036.4 |
| histidine phosphatase family protein | PQ455_20870 | A1JJB8 | - | 2287 - 2907 | 22887.0 |
| type ii toxin-antitoxin system yafq family toxin | PQ455_20875 | Q47149 | - | 2910 - 3230 | 12254.7 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | PQ455_20880 | A0A140ND86 | - | 3199 - 3480 | 10276.3 |
| transcription elongation protein sprt | PQ455_20885 | Not Available | + | 3894 - 4535 | 22642.1 |
| aaa family atpase | PQ455_20890 | P07673 | + | 4633 - 5286 | 22783.1 |
| hypothetical protein | PQ455_20895 | Not Available | + | 5283 - 5600 | 10935.9 |
| hypothetical protein | PQ455_20900 | Not Available | + | 5641 - 6000 | 13113.5 |
| Trna-ile | Not Available | Not Available | + | 6091 - 6160 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.