Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_20805 | Not Available | + | 40234 - 40722 | 17817.5 |
| dna mismatch endonuclease vsr | PQ455_20810 | Q56829 | - | 40719 - 41126 | 16141.4 |
| toll/interleukin-1 receptor domain-containing protein | PQ455_20815 | A0A5B8Z260 | - | 41235 - 41795 | 20987.8 |
| tir domain-containing protein | PQ455_20820 | J8G8J6 | - | 41810 - 42292 | 18041.3 |
| sir2 family protein | PQ455_20825 | J8G6Z1 | - | 42328 - 43770 | 52706.9 |
| hypothetical protein | PQ455_20830 | Not Available | - | 43831 - 44196 | 13404.5 |
| mobf family relaxase | PQ455_20835 | P22706 | - | 44201 - 47560 | 119648.0 |
| hypothetical protein | PQ455_20840 | Not Available | - | 47557 - 48387 | 29989.5 |
| helix-turn-helix transcriptional regulator | PQ455_20845 | Not Available | + | 48498 - 48923 | 15741.0 |
| hypothetical protein | PQ455_20850 | Not Available | + | 48925 - 49065 | 5480.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.