Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | PQ455_20350 | Not Available | - | 79788 - 80261 | 17088.2 |
| is256 family transposase | PQ455_20355 | P60231 | - | 80413 - 81615 | 44819.3 |
| ferritin-like domain-containing protein | PQ455_20360 | Not Available | - | 81667 - 82326 | 26661.2 |
| methyl-accepting chemotaxis protein | PQ455_20365 | P55652 | + | 82690 - 84075 | 48681.9 |
| duf2490 domain-containing protein | PQ455_20370 | Q49116 | - | 84174 - 84527 | 13092.7 |
| transposase | PQ455_20375 | P55640 | + | 84581 - 85003 | 15119.0 |
| is66 family insertion sequence element accessory protein tnpb | PQ455_20380 | P55503 | + | 85000 - 85353 | 12871.0 |
| is66 family transposase | PQ455_20385 | P55630 | + | 85421 - 86980 | 56936.3 |
| duf2490 domain-containing protein | PQ455_20390 | Q49116 | - | 87008 - 87481 | 17201.6 |
| cytochrome d ubiquinol oxidase subunit ii | PQ455_20395 | P0ABK4 | - | 87498 - 88505 | 36878.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.