Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| virb3 family type iv secretion system protein | PQ455_20250 | P0A3V9 | - | 62539 - 62883 | 12491.4 |
| trbc/virb2 family protein | PQ455_20255 | P17792 | - | 62887 - 63219 | 11666.6 |
| lytic transglycosylase domain-containing protein | PQ455_20260 | Q2YIT5 | - | 63216 - 63896 | 23597.2 |
| hypothetical protein | PQ455_20265 | Not Available | - | 63893 - 64255 | 12459.3 |
| phytanoyl-coa dioxygenase family protein | PQ455_20270 | P9WI88 | - | 64387 - 65178 | 29428.1 |
| is3 family transposase | PQ455_20275 | P24577 | - | 65144 - 66264 | 42713.3 |
| hypothetical protein | PQ455_20280 | Not Available | - | 66215 - 66502 | 10409.5 |
| acyl-homoserine-lactone synthase | PQ455_20285 | O30920 | - | 66520 - 67080 | 21048.2 |
| luxr family transcriptional regulator | PQ455_20290 | P0A3J5 | - | 67211 - 67960 | 26919.3 |
| luxr family transcriptional regulator | PQ455_20295 | P74946 | - | 67978 - 68739 | 28581.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.