Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PQ455_20200 | Not Available | - | 50974 - 51138 | 6225.47 |
| dna transfer protein | PQ455_20205 | Not Available | - | 51166 - 52125 | 34591.3 |
| type iv secretory system conjugative dna transfer family protein | PQ455_20210 | P13464 | - | 52115 - 54073 | 71722.0 |
| p-type dna transfer atpase virb11 | PQ455_20215 | Q9RNC7 | - | 54090 - 55094 | 36339.7 |
| type iv secretion system protein virb10 | PQ455_20220 | Q6G2B2 | - | 55097 - 56224 | 38786.1 |
| p-type conjugative transfer protein virb9 | PQ455_20225 | Q6FYW2 | - | 56332 - 57186 | 31443.3 |
| virb8 family protein | PQ455_20230 | Q6G2B4 | - | 57183 - 57863 | 25320.8 |
| type iv secretion system protein | PQ455_20235 | Q6FYW5 | - | 58227 - 59171 | 33428.1 |
| type iv secretion system protein | PQ455_20240 | Q9RPY0 | - | 59411 - 60079 | 23880.0 |
| virb4 family type iv secretion/conjugal transfer atpase | PQ455_20245 | Q9R2W4 | - | 60129 - 62519 | 88995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.