Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antitoxin of toxin-antitoxin stability system | PQ455_19950 | Not Available | + | 5226 - 5870 | 24376.2 |
| phospholipase d-like domain-containing protein | PQ455_19955 | Not Available | + | 5867 - 6442 | 21641.8 |
| atp-dependent helicase | PQ455_19960 | P0A5A4 | - | 6982 - 8772 | 66233.2 |
| aaa family atpase | PQ455_19965 | Q8EU85 | - | 8772 - 10907 | 78201.8 |
| 3'-5' exonuclease | PQ455_19970 | Q1WUF9 | - | 10938 - 11840 | 34056.6 |
| rcnb family protein | PQ455_19975 | Not Available | - | 12366 - 12863 | 17860.6 |
| atp-binding protein | PQ455_19980 | Q9HZ47 | - | 12945 - 14183 | 45407.1 |
| response regulator | PQ455_19985 | P0AA18 | - | 14285 - 15022 | 27540.5 |
| ef-hand domain-containing protein | PQ455_19990 | Q7U5E8 | - | 15104 - 15361 | 9082.88 |
| hypothetical protein | PQ455_19995 | Not Available | + | 15586 - 15996 | 14261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.