Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf159 family protein | PQ455_19650 | P12364 | - | 139272 - 140545 | 45610.6 |
| duf159 family protein | PQ455_19655 | P50358 | + | 140616 - 141373 | 26588.4 |
| duf159 family protein | PQ455_19660 | P12364 | - | 141388 - 141639 | 9301.06 |
| aaa family atpase | PQ455_19665 | P05682 | + | 141781 - 142929 | 41945.7 |
| parb/repb/spo0j family partition protein | PQ455_19670 | P62559 | + | 142980 - 144035 | 38472.6 |
| replication initiator protein a | PQ455_19675 | P60119 | + | 144115 - 145305 | 44686.4 |
| hypothetical protein | PQ455_19680 | Not Available | + | 145708 - 145917 | 7667.99 |
| helix-turn-helix transcriptional regulator | PQ455_19685 | Not Available | - | 146484 - 146765 | 10359.7 |
| hypothetical protein | PQ455_19690 | Not Available | + | 146830 - 147408 | 21711.1 |
| hypothetical protein | PQ455_19695 | Not Available | + | 147405 - 147665 | 9027.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.