Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ455_19350 | P10183 | + | 82587 - 83522 | 34106.0 |
| duf159 family protein | PQ455_19355 | Q6G7C8 | + | 83607 - 84380 | 27367.6 |
| is21 family transposase | PQ455_19360 | Q46087 | + | 84502 - 86013 | 57234.8 |
| is21-like element helper atpase istb | PQ455_19365 | P15026 | + | 86000 - 86728 | 26579.1 |
| hypothetical protein | PQ455_19370 | Not Available | - | 87099 - 88943 | 67731.9 |
| hypothetical protein | PQ455_19375 | Not Available | - | 88936 - 89424 | 18222.8 |
| hypothetical protein | PQ455_19380 | Not Available | - | 89421 - 90395 | 36171.8 |
| hypothetical protein | PQ455_19385 | Not Available | - | 90614 - 90847 | 8678.45 |
| 3'-5' exonuclease | PQ455_19390 | Q5M1Y0 | - | 90844 - 91710 | 32005.2 |
| hu family dna-binding protein | PQ455_19395 | P0A3H2 | - | 91783 - 92058 | 9334.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.