Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-dopachrome tautomerase-related protein | PQ455_19250 | O18330 | + | 62907 - 64013 | 39674.2 |
| catalase family protein | PQ455_19255 | P55495 | + | 64022 - 65104 | 39509.1 |
| 2fe-2s iron-sulfur cluster-binding protein | PQ455_19260 | Q8X6I9 | + | 65128 - 65640 | 17982.5 |
| xanthine dehydrogenase family protein subunit m | PQ455_19265 | P77324 | + | 65637 - 66650 | 36159.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | PQ455_19270 | P77489 | + | 66663 - 68909 | 80467.7 |
| tmem175 family protein | PQ455_19275 | S5VBU1 | - | 68953 - 69543 | 21123.6 |
| aldo/keto reductase | PQ455_19280 | P76234 | - | 69607 - 70437 | 29836.8 |
| helix-turn-helix domain containing protein | PQ455_19285 | P75952 | - | 70513 - 71091 | 20359.3 |
| zinc-dependent alcohol dehydrogenase family protein | PQ455_19290 | P28304 | + | 71230 - 72219 | 34724.7 |
| metal/formaldehyde-sensitive transcriptional repressor | PQ455_19295 | A7ZIA5 | + | 72426 - 72716 | 10218.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.