Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | PQ455_19150 | P18358 | - | 46057 - 46629 | 20811.3 |
| mu transposase c-terminal domain-containing protein | PQ455_19155 | P18416 | + | 46821 - 48221 | 52200.9 |
| aaa family atpase | PQ455_19160 | P18179 | + | 48148 - 49026 | 32235.3 |
| recombinase family protein | PQ455_19165 | P03014 | + | 49138 - 49719 | 21367.8 |
| hypothetical protein | PQ455_19170 | Not Available | + | 49740 - 50564 | 30259.5 |
| transposase | PQ455_19175 | Not Available | + | 50699 - 51259 | 21413.9 |
| recombinase family protein | PQ455_19180 | P03014 | - | 51266 - 51832 | 20260.6 |
| duf305 domain-containing protein | PQ455_19185 | Not Available | + | 52065 - 52430 | 12768.6 |
| beta-propeller fold lactonase family protein | PQ455_19190 | Not Available | + | 52432 - 53871 | 50264.2 |
| rna polymerase sigma factor | PQ455_19195 | P66808 | + | 53873 - 54382 | 19108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.