Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_19100 | Not Available | - | 36205 - 36546 | 12149.8 |
| duf1259 domain-containing protein | PQ455_19105 | Not Available | - | 36768 - 37667 | 31280.8 |
| hypothetical protein | PQ455_19110 | Not Available | - | 37684 - 37806 | 4227.22 |
| chromate resistance protein | PQ455_19115 | P17552 | + | 37901 - 38851 | 34690.0 |
| chromate efflux transporter | PQ455_19120 | Q55027 | + | 38854 - 40257 | 48805.0 |
| duf3147 family protein | PQ455_19125 | Not Available | - | 40254 - 40604 | 12599.1 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | PQ455_19130 | Q6D7E5 | - | 40604 - 41545 | 33094.8 |
| metal/formaldehyde-sensitive transcriptional repressor | PQ455_19135 | P55757 | - | 41557 - 41832 | 9581.49 |
| transposase | PQ455_19140 | Not Available | + | 42039 - 42905 | 31884.2 |
| tn3 family transposase | PQ455_19145 | P51565 | - | 42927 - 45893 | 108078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.