Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_19000 | Not Available | + | 17006 - 17275 | 8717.88 |
| periplasmic heavy metal sensor | PQ455_19005 | P37975 | + | 17272 - 17712 | 15999.5 |
| rna polymerase sigma factor | PQ455_19010 | P37978 | + | 17723 - 18292 | 20944.1 |
| copper resistance system multicopper oxidase | PQ455_19015 | Q47452 | + | 18360 - 20393 | 72838.8 |
| copper resistance protein b | PQ455_19020 | P12375 | + | 20390 - 21682 | 46075.0 |
| cytochrome c | PQ455_19025 | Not Available | + | 21686 - 22282 | 21584.3 |
| hypothetical protein | PQ455_19030 | Not Available | + | 22308 - 23045 | 27114.0 |
| duf305 domain-containing protein | PQ455_19035 | Not Available | + | 23206 - 23571 | 13382.4 |
| duf411 domain-containing protein | PQ455_19040 | Not Available | + | 23643 - 24092 | 15715.3 |
| tolc family protein | PQ455_19045 | Not Available | + | 24978 - 26207 | 43552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.