Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PQ455_16710 | P29113 | + | 3469976 - 3471085 | 40300.2 |
| hypothetical protein | PQ455_16715 | Q8HYJ3 | - | 3471091 - 3472101 | 37239.7 |
| cation transporter | PQ455_18910 | Q8X400 | - | 1129 - 1755 | 21560.2 |
| helix-turn-helix domain-containing protein | PQ455_18915 | Q9HV30 | + | 1831 - 2250 | 15351.6 |
| aspartyl protease family protein | PQ455_18920 | Not Available | - | 2244 - 3473 | 42871.1 |
| is21 family transposase | PQ455_18925 | Q46087 | + | 3619 - 5130 | 57427.1 |
| is21-like element helper atpase istb | PQ455_18930 | P15026 | + | 5117 - 5845 | 26577.1 |
| gdccvxc domain-containing (seleno)protein | PQ455_18935 | Not Available | - | 6234 - 6455 | 7666.34 |
| mercuric transporter mert family protein | PQ455_18940 | Not Available | - | 6455 - 6871 | 14238.6 |
| helix-turn-helix domain-containing protein | PQ455_18945 | P13111 | + | 6934 - 7350 | 14986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.