Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_16660 | P39851 | - | 3458137 - 3459045 | 32214.8 |
| gnvr domain-containing protein | PQ455_16665 | P33698 | - | 3459042 - 3460406 | 49698.4 |
| atp-binding protein | PQ455_16670 | Not Available | - | 3460406 - 3462253 | 65766.8 |
| polysaccharide biosynthesis protein gume | PQ455_16675 | Not Available | - | 3462342 - 3463706 | 49566.1 |
| glycosyltransferase family 2 protein | PQ455_16680 | Q46632 | - | 3463703 - 3464707 | 36571.6 |
| wecb/taga/cpsf family glycosyltransferase | PQ455_16685 | Q8RKI7 | + | 3465183 - 3465947 | 28790.6 |
| 4-hydroxybenzoate octaprenyltransferase | PQ455_16690 | Q8I7J4 | - | 3466027 - 3466926 | 31659.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PQ455_16695 | Q92J59 | + | 3467091 - 3467831 | 26352.1 |
| glutamate--cysteine ligase | PQ455_16700 | Q9ZNX6 | + | 3467889 - 3469265 | 50704.4 |
| Trna-gly | Not Available | Not Available | + | 3469399 - 3469472 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.