Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | PQ455_16610 | Q1GP41 | - | 3449451 - 3450371 | 32797.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | PQ455_16615 | Q1GP42 | + | 3450416 - 3451450 | 34996.2 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | PQ455_16620 | Q1GP43 | + | 3451575 - 3452552 | 33462.5 |
| hypothetical protein | PQ455_16625 | Not Available | + | 3452554 - 3452718 | 6009.36 |
| hypothetical protein | PQ455_16630 | Not Available | + | 3452682 - 3453140 | 16746.5 |
| cyclopropane-fatty-acyl-phospholipid synthase | PQ455_16635 | P0A9H8 | - | 3453132 - 3454364 | 46502.7 |
| hypothetical protein | PQ455_16640 | Not Available | - | 3454440 - 3454694 | 9234.27 |
| glycoside hydrolase family 5 protein | PQ455_16645 | P58599 | + | 3454792 - 3455955 | 42695.5 |
| oligosaccharide flippase family protein | PQ455_16650 | P33699 | + | 3455957 - 3457426 | 50949.1 |
| phytanoyl-coa dioxygenase family protein | PQ455_16655 | Not Available | - | 3457432 - 3458106 | 24036.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.