Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | PQ455_16560 | Q2G512 | + | 3440886 - 3442829 | 70101.3 |
| quinoprotein relay system zinc metallohydrolase 1 | PQ455_16565 | Not Available | - | 3442924 - 3443880 | 33462.1 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | PQ455_16570 | Not Available | - | 3443877 - 3444701 | 28891.2 |
| rhodanese | PQ455_16575 | Not Available | + | 3444766 - 3445290 | 18776.8 |
| response regulator transcription factor | PQ455_16580 | A6WZ81 | - | 3445383 - 3446078 | 25774.5 |
| rna pseudouridine synthase | PQ455_16585 | O66114 | + | 3446258 - 3446917 | 23646.8 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | PQ455_16590 | P45388 | + | 3446904 - 3447317 | 14909.2 |
| gaf domain-containing protein | PQ455_16595 | O66116 | + | 3447412 - 3447897 | 16528.7 |
| hypothetical protein | PQ455_16600 | Not Available | - | 3447941 - 3448768 | 29032.1 |
| uroporphyrinogen-iii synthase | PQ455_16605 | Not Available | - | 3448786 - 3449454 | 22512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.