Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 2 family protein | PQ455_16460 | Q92383 | + | 3421090 - 3421716 | 22262.8 |
| ompa family protein | PQ455_16465 | Q7NFT5 | - | 3421727 - 3422299 | 19280.8 |
| hypothetical protein | PQ455_16470 | Not Available | - | 3422296 - 3422844 | 18620.2 |
| yggs family pyridoxal phosphate-dependent enzyme | PQ455_16475 | P24562 | - | 3422900 - 3423562 | 22945.8 |
| thiamine phosphate synthase | PQ455_16480 | Not Available | + | 3423587 - 3424123 | 19641.1 |
| pas-domain containing protein | PQ455_16485 | Q9HUI3 | - | 3424183 - 3426447 | 81802.0 |
| fist n-terminal domain-containing protein | PQ455_16490 | Not Available | - | 3426447 - 3427619 | 41903.9 |
| duf779 domain-containing protein | PQ455_16495 | Not Available | - | 3427652 - 3428089 | 15234.2 |
| aldehyde dehydrogenase family protein | PQ455_16500 | P46368 | - | 3428421 - 3429941 | 55490.5 |
| pseudoazurin | PQ455_16505 | P80401 | + | 3430130 - 3430567 | 15090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.