Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein carrier protein lola | PQ455_16410 | Q7NXL2 | - | 3410057 - 3410674 | 22201.9 |
| signal peptidase i | PQ455_16415 | P41026 | - | 3410988 - 3411956 | 35136.2 |
| dna translocase ftsk 4tm domain-containing protein | PQ455_16420 | Q8YJB8 | - | 3411966 - 3414311 | 84277.3 |
| hypothetical protein | PQ455_16425 | A5FYQ3 | + | 3414665 - 3415126 | 16413.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PQ455_16430 | A7HSQ6 | - | 3415184 - 3416764 | 54580.4 |
| heparinase ii/iii family protein | PQ455_16435 | A0A0H3C3S1 | - | 3416790 - 3418499 | 60719.9 |
| ribulose-phosphate 3-epimerase | PQ455_16440 | P51012 | - | 3418499 - 3419173 | 23705.8 |
| queuosine precursor transporter | PQ455_16445 | P54163 | - | 3419217 - 3419849 | 22533.7 |
| hypothetical protein | PQ455_16450 | Not Available | - | 3420003 - 3420479 | 16786.1 |
| 2fe-2s iron-sulfur cluster-binding protein | PQ455_16455 | X5CWH9 | - | 3420690 - 3421007 | 11274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.