Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | PQ455_16360 | Not Available | - | 3399907 - 3400395 | 17693.4 |
| d-glycerate dehydrogenase | PQ455_16365 | Q9C4M5 | + | 3400496 - 3401488 | 34926.3 |
| hypothetical protein | PQ455_16370 | Not Available | + | 3401698 - 3401985 | 9712.91 |
| hypothetical protein | PQ455_16375 | Not Available | - | 3402044 - 3402496 | 17398.5 |
| acrb/acrd/acrf family protein | PQ455_16380 | Not Available | - | 3402548 - 3404317 | 64228.9 |
| gtra family protein | PQ455_16385 | Not Available | + | 3404387 - 3404833 | 17011.8 |
| glycosyltransferase family 2 protein | PQ455_16390 | Q55487 | + | 3404833 - 3405816 | 36248.2 |
| class i sam-dependent methyltransferase | PQ455_16395 | A6V2Q4 | + | 3405816 - 3406550 | 26703.5 |
| hypothetical protein | PQ455_16400 | Not Available | - | 3406478 - 3408076 | 59677.2 |
| hypothetical protein | PQ455_16405 | Not Available | + | 3408176 - 3409771 | 57231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.