Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | PQ455_16310 | P21688 | + | 3388761 - 3389261 | 18657.8 |
| aldo/keto reductase | PQ455_16315 | Q52472 | - | 3389275 - 3390381 | 39430.1 |
| dna polymerase iii subunit delta | PQ455_16320 | Not Available | - | 3390514 - 3391539 | 35869.0 |
| lps assembly lipoprotein lpte | PQ455_16325 | Not Available | - | 3391536 - 3392057 | 18503.1 |
| leucine--trna ligase | PQ455_16330 | A5VA89 | - | 3392054 - 3394561 | 92275.9 |
| duf3576 domain-containing protein | PQ455_16335 | Q9ZDB2 | - | 3394582 - 3395025 | 15727.1 |
| porin | PQ455_16340 | Not Available | + | 3395239 - 3395958 | 25418.2 |
| pyridoxal-phosphate dependent enzyme | PQ455_16345 | A4F2N8 | - | 3396156 - 3397127 | 32312.1 |
| type iii plp-dependent enzyme | PQ455_16350 | O50657 | + | 3397304 - 3398530 | 44297.9 |
| deoxyhypusine synthase | PQ455_16355 | A9KDQ8 | + | 3398708 - 3399760 | 38401.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.