Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | PQ455_16260 | A3PMF8 | + | 3378959 - 3380161 | 42970.2 |
| exodeoxyribonuclease iii | PQ455_16265 | P0A1B0 | + | 3380229 - 3381005 | 28315.6 |
| glutaminyl-peptide cyclotransferase | PQ455_16270 | Q84WV9 | + | 3381005 - 3381760 | 28309.3 |
| acetylglutamate kinase | PQ455_16275 | A5VAE6 | - | 3381767 - 3382639 | 30353.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | PQ455_16280 | Q87AR1 | - | 3382834 - 3384117 | 44509.6 |
| zinc metalloprotease htpx | PQ455_16285 | A5V7N3 | - | 3384154 - 3385101 | 33065.6 |
| duf1674 domain-containing protein | PQ455_16290 | Not Available | + | 3385190 - 3385378 | 6832.92 |
| electron transfer flavoprotein subunit alpha/fixb family protein | PQ455_16295 | Q9HZP7 | - | 3385595 - 3386524 | 31044.1 |
| electron transfer flavoprotein subunit beta/fixa family protein | PQ455_16300 | P53575 | - | 3386521 - 3387270 | 26444.4 |
| adp-forming succinate--coa ligase subunit beta | PQ455_16305 | A5VB78 | - | 3387431 - 3388630 | 42174.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.