Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_16160 | Not Available | + | 3363119 - 3363439 | 11522.0 |
| acyl-coa thioesterase | PQ455_16165 | P44886 | + | 3363436 - 3363807 | 13234.1 |
| duf4167 domain-containing protein | PQ455_16170 | Not Available | - | 3363896 - 3364837 | 35862.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | PQ455_16175 | Q2RWE0 | - | 3365161 - 3365976 | 27876.3 |
| hypothetical protein | PQ455_16180 | Not Available | - | 3365976 - 3366416 | 15204.0 |
| peptide chain release factor 1 | PQ455_16185 | A5V9C3 | - | 3366422 - 3367504 | 39184.4 |
| histidine--trna ligase | PQ455_16190 | Q2GBN6 | - | 3367857 - 3369113 | 45372.9 |
| inorganic diphosphatase | PQ455_16195 | Q89WY0 | + | 3369210 - 3369767 | 20563.7 |
| duf177 domain-containing protein | PQ455_16200 | Not Available | - | 3369865 - 3370395 | 18331.5 |
| ubiquinol-cytochrome c chaperone family protein | PQ455_16205 | Not Available | - | 3370392 - 3370910 | 18702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.