Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m14 family metallocarboxypeptidase | PQ455_16110 | Not Available | - | 3353622 - 3354542 | 33314.1 |
| hypothetical protein | PQ455_16115 | Q47452 | + | 3355235 - 3355495 | 9197.2 |
| hypothetical protein | PQ455_16120 | Not Available | - | 3355847 - 3356230 | 13397.1 |
| Trna-met | Not Available | Not Available | + | 3356567 - 3356643 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3356784 - 3356898 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3357011 - 3359801 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3360188 - 3360263 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3360297 - 3360373 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3360589 - 3362077 | Not Available |
| cbs domain-containing protein | PQ455_16155 | Q9LEV3 | - | 3362605 - 3363033 | 15142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.