Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase kdpd | PQ455_16060 | P21865 | - | 3340999 - 3343680 | 95533.7 |
| potassium-transporting atpase subunit kdpc | PQ455_16065 | Q8U9E0 | - | 3343677 - 3344258 | 19826.8 |
| potassium-transporting atpase subunit kdpb | PQ455_16070 | Q8U9D9 | - | 3344270 - 3346306 | 70136.2 |
| potassium-transporting atpase subunit kdpa | PQ455_16075 | Q89FC2 | - | 3346321 - 3348024 | 60000.2 |
| k(+)-transporting atpase subunit f | PQ455_16080 | Not Available | - | 3348035 - 3348124 | 3174.09 |
| Trna-thr | Not Available | Not Available | + | 3348434 - 3348509 | Not Available |
| hypothetical protein | PQ455_16090 | Not Available | - | 3348597 - 3348800 | 7065.85 |
| pepsy domain-containing protein | PQ455_16095 | P42514 | - | 3348797 - 3349921 | 40132.7 |
| tonb-dependent siderophore receptor | PQ455_16100 | Q47162 | - | 3349951 - 3352113 | 78009.8 |
| mfs transporter | PQ455_16105 | A0QYL8 | + | 3352235 - 3353557 | 44668.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.