Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | PQ455_16010 | A9UWF0 | - | 3327898 - 3328605 | 24890.2 |
| cytochrome o ubiquinol oxidase subunit iv | PQ455_16015 | P0ABJ7 | - | 3328602 - 3329018 | 14928.4 |
| cytochrome o ubiquinol oxidase subunit iii | PQ455_16020 | Q9WWR3 | - | 3329015 - 3329644 | 22790.1 |
| cytochrome o ubiquinol oxidase subunit i | PQ455_16025 | P0ABJ0 | - | 3329648 - 3331651 | 74943.0 |
| ubiquinol oxidase subunit ii | PQ455_16030 | Q9I427 | - | 3331651 - 3332808 | 41896.8 |
| mfs transporter | PQ455_16035 | P37643 | + | 3332988 - 3334316 | 46949.8 |
| mfs transporter | PQ455_16040 | P37514 | + | 3334381 - 3335832 | 51089.5 |
| llm class flavin-dependent oxidoreductase | PQ455_16045 | P0ADV6 | + | 3335897 - 3336895 | 35661.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | PQ455_16050 | P36683 | - | 3337215 - 3340007 | 99749.0 |
| response regulator transcription factor | PQ455_16055 | P9WGN0 | - | 3340316 - 3341002 | 25181.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.