Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 3313475 - 3313550 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3313584 - 3313660 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3313876 - 3315364 | Not Available |
| nad(p)/fad-dependent oxidoreductase | PQ455_15975 | Q05627 | + | 3315944 - 3317578 | 58077.5 |
| hypothetical protein | PQ455_15980 | Not Available | - | 3317829 - 3318995 | 44047.8 |
| hypothetical protein | PQ455_15985 | Not Available | - | 3318997 - 3319404 | 14760.0 |
| translocation/assembly module tamb domain-containing protein | PQ455_15990 | Q57523 | - | 3319659 - 3323873 | 145181.0 |
| bama/tama family outer membrane protein | PQ455_15995 | D2TN56 | - | 3323873 - 3325921 | 72264.0 |
| response regulator transcription factor | PQ455_16000 | O82868 | - | 3326052 - 3326594 | 19796.5 |
| atp-binding protein | PQ455_16005 | P0C0Z0 | - | 3326591 - 3327901 | 46953.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.