Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_15910 | A0A0K2VM55 | + | 3302029 - 3303234 | 43105.7 |
| fumarylacetoacetate hydrolase family protein | PQ455_15915 | D4GP28 | + | 3303350 - 3304465 | 39492.2 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_15920 | Q9A9Z0 | + | 3304486 - 3305259 | 27586.0 |
| smp-30/gluconolactonase/lre family protein | PQ455_15925 | Q9A9Z1 | + | 3305259 - 3306140 | 30507.0 |
| sugar porter family mfs transporter | PQ455_15930 | P15729 | + | 3306161 - 3307561 | 49234.5 |
| aldose 1-epimerase | PQ455_15935 | P76584 | + | 3307558 - 3308421 | 31843.9 |
| is3 family transposase | PQ455_15940 | P24577 | + | 3308478 - 3309598 | 42713.3 |
| Trna-met | Not Available | Not Available | + | 3309854 - 3309930 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3310071 - 3310185 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3310298 - 3313088 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.