Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class ii aldolase/adducin family protein | PQ455_15810 | Q9A8Z4 | - | 3274155 - 3274898 | 27040.6 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | PQ455_15815 | P14002 | - | 3274895 - 3277267 | 85085.5 |
| abc transporter atp-binding protein | PQ455_15820 | Q0K998 | - | 3277288 - 3278400 | 39910.5 |
| carbohydrate abc transporter permease | PQ455_15825 | O58967 | - | 3278403 - 3279275 | 30957.6 |
| sugar abc transporter permease | PQ455_15830 | O58968 | - | 3279272 - 3280144 | 32223.0 |
| abc transporter substrate-binding protein | PQ455_15835 | Q8FVX5 | - | 3280134 - 3281384 | 45149.8 |
| tonb-dependent receptor | PQ455_15840 | P46359 | - | 3281452 - 3283656 | 80621.1 |
| pdr/vanb family oxidoreductase | PQ455_15845 | Q52186 | - | 3284099 - 3285043 | 33723.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PQ455_15850 | H9N289 | - | 3285051 - 3286094 | 39113.6 |
| gntr family transcriptional regulator | PQ455_15855 | O05494 | - | 3286091 - 3286855 | 28468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.