Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | PQ455_15710 | B2VK47 | + | 3251644 - 3252120 | 16998.1 |
| retropepsin-like aspartic protease | PQ455_15715 | Not Available | + | 3252117 - 3253067 | 32711.8 |
| zinc-binding dehydrogenase | PQ455_15720 | O53901 | + | 3253078 - 3254034 | 32390.2 |
| hypothetical protein | PQ455_15725 | Not Available | + | 3254055 - 3254330 | 9982.73 |
| zinc-dependent alcohol dehydrogenase family protein | PQ455_15730 | Q84V25 | + | 3254327 - 3255328 | 35415.7 |
| sdr family oxidoreductase | PQ455_15735 | P39333 | + | 3255492 - 3256232 | 24671.3 |
| alpha/beta hydrolase | PQ455_15740 | P53750 | + | 3256252 - 3257148 | 33157.1 |
| glycosyltransferase | PQ455_15745 | Not Available | - | 3257163 - 3257897 | 26250.8 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_15750 | Not Available | + | 3258077 - 3259069 | 33760.4 |
| efflux rnd transporter permease subunit | PQ455_15755 | P94177 | + | 3259071 - 3262178 | 110609.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.