Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | PQ455_15560 | Q3J6K9 | + | 3213754 - 3214737 | 33767.6 |
| class i adenylate-forming enzyme family protein | PQ455_15565 | Q7WSH3 | + | 3214844 - 3216562 | 60415.4 |
| 2-oxo acid dehydrogenase subunit e2 | PQ455_15570 | Q9R9N3 | + | 3216559 - 3217299 | 26116.5 |
| tonb-dependent receptor | PQ455_15575 | P46359 | + | 3217495 - 3219876 | 85338.0 |
| tigr03619 family f420-dependent llm class oxidoreductase | PQ455_15580 | P9WKP0 | + | 3219917 - 3220837 | 33274.8 |
| sdr family oxidoreductase | PQ455_15585 | T2KLZ8 | + | 3220834 - 3221598 | 26196.8 |
| llm class f420-dependent oxidoreductase | PQ455_15590 | P9WKP0 | + | 3221628 - 3222515 | 32287.6 |
| nuclear transport factor 2 family protein | PQ455_15595 | P9WL24 | + | 3222512 - 3222934 | 15534.5 |
| duf4238 domain-containing protein | PQ455_15600 | Not Available | - | 3223108 - 3223986 | 32773.5 |
| thiamine pyrophosphate-binding protein | PQ455_15605 | Q57725 | - | 3224870 - 3226651 | 63308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.