Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_15510 | Not Available | - | 3203349 - 3204611 | 43686.9 |
| peroxide stress protein yaaa | PQ455_15515 | A5VF37 | + | 3204782 - 3205540 | 28211.7 |
| gnat family n-acetyltransferase | PQ455_15520 | Q82G40 | + | 3205519 - 3206211 | 24257.3 |
| dna gyrase subunit a | PQ455_15525 | Q1RID9 | + | 3206321 - 3209104 | 101003.0 |
| duf952 domain-containing protein | PQ455_15530 | Not Available | + | 3209131 - 3209487 | 13117.8 |
| lipoyl domain-containing protein | PQ455_15535 | P27747 | - | 3209539 - 3209769 | 7852.27 |
| alpha-ketoacid dehydrogenase subunit beta | PQ455_15540 | P27746 | - | 3209769 - 3210803 | 36283.7 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | PQ455_15545 | O31404 | - | 3210800 - 3211783 | 35045.6 |
| alpha/beta hydrolase | PQ455_15550 | Q400K3 | - | 3211936 - 3212790 | 30089.2 |
| tetr/acrr family transcriptional regulator | PQ455_15555 | P67443 | + | 3212956 - 3213642 | 25258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.