Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease/substrate-binding protein | PQ455_15460 | B5Z7I3 | + | 3194277 - 3195818 | 53116.5 |
| duf2155 domain-containing protein | PQ455_15465 | Not Available | - | 3195891 - 3196061 | 6110.3 |
| tolc family outer membrane protein | PQ455_15470 | Q8G0Y6 | - | 3196494 - 3198023 | 53582.2 |
| protein-l-isoaspartate o-methyltransferase | PQ455_15475 | B1ZJW1 | - | 3198051 - 3198701 | 22105.8 |
| Trna-cys | Not Available | Not Available | + | 3199041 - 3199114 | Not Available |
| hypothetical protein | PQ455_15485 | Not Available | - | 3199157 - 3199507 | 12842.6 |
| alpha/beta hydrolase | PQ455_15490 | Not Available | - | 3199590 - 3200789 | 43933.4 |
| Trna-met | Not Available | Not Available | + | 3200872 - 3200947 | Not Available |
| sensor histidine kinase | PQ455_15500 | Not Available | - | 3200995 - 3202551 | 54572.6 |
| lrp/asnc family transcriptional regulator | PQ455_15505 | P56901 | + | 3202785 - 3203195 | 14782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.