Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maf family protein | PQ455_15410 | Q2RQN0 | - | 3186830 - 3187411 | 20047.3 |
| translation initiation factor if-1 | PQ455_15415 | A5VDT7 | - | 3187428 - 3187646 | 8409.4 |
| threonine synthase | PQ455_15420 | P29363 | + | 3187836 - 3189251 | 49895.6 |
| pitrilysin family protein | PQ455_15425 | O86835 | + | 3189248 - 3190477 | 42745.8 |
| class i sam-dependent methyltransferase | PQ455_15430 | Q482P5 | + | 3190642 - 3191511 | 32488.8 |
| heme exporter protein ccmb | PQ455_15435 | P52219 | - | 3191555 - 3192202 | 21318.1 |
| heme abc exporter atp-binding protein ccma | PQ455_15440 | Q1GS38 | - | 3192199 - 3192774 | 18745.0 |
| metallopeptidase family protein | PQ455_15445 | Not Available | - | 3192771 - 3193172 | 14419.0 |
| 4a-hydroxytetrahydrobiopterin dehydratase | PQ455_15450 | A5FWK8 | + | 3193223 - 3193519 | 10855.8 |
| atp-binding cassette domain-containing protein | PQ455_15455 | G2JZ44 | + | 3193516 - 3194280 | 26347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.