Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | PQ455_15360 | Q92J97 | + | 3177508 - 3179310 | 65273.6 |
| tolc family protein | PQ455_15365 | P24145 | - | 3179365 - 3180765 | 48261.1 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_15370 | P76185 | - | 3180771 - 3181643 | 31634.4 |
| duf1656 domain-containing protein | PQ455_15375 | Not Available | - | 3181640 - 3181855 | 7537.87 |
| fusc family protein | PQ455_15380 | Q6DAH4 | - | 3181852 - 3183894 | 72752.0 |
| marr family transcriptional regulator | PQ455_15385 | A1JNY1 | - | 3183891 - 3184340 | 16475.8 |
| hypothetical protein | PQ455_15390 | Q09327 | - | 3184475 - 3185293 | 31610.5 |
| Trna-phe | Not Available | Not Available | + | 3185505 - 3185580 | Not Available |
| dna gyrase inhibitor yacg | PQ455_15400 | Q5NNS5 | - | 3185654 - 3185845 | 6847.94 |
| ribonuclease | PQ455_15405 | Not Available | - | 3185826 - 3186818 | 34179.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.