Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_15310 | Not Available | + | 3169125 - 3169445 | 11881.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | PQ455_15315 | P25539 | + | 3169481 - 3170446 | 33975.0 |
| riboflavin synthase | PQ455_15320 | Q2YN92 | + | 3170456 - 3171067 | 20956.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | PQ455_15325 | O66679 | + | 3171057 - 3172223 | 42069.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | PQ455_15330 | A5V939 | + | 3172223 - 3172642 | 14515.6 |
| 50s ribosomal protein l11 methyltransferase | PQ455_15335 | A9M676 | - | 3173322 - 3174236 | 32061.8 |
| sdr family oxidoreductase | PQ455_15340 | P73574 | - | 3174226 - 3174936 | 24447.9 |
| methyl-accepting chemotaxis protein | PQ455_15345 | Q2W8M7 | - | 3175142 - 3176512 | 47404.0 |
| succinate dehydrogenase, cytochrome b556 subunit | PQ455_15350 | Q59659 | + | 3176661 - 3177101 | 15881.7 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | PQ455_15355 | Q59660 | + | 3177101 - 3177508 | 14501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.