Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | PQ455_15260 | O96876 | + | 3160202 - 3160663 | 15636.1 |
| gnat family n-acetyltransferase | PQ455_15265 | Not Available | + | 3160668 - 3161801 | 41208.8 |
| coq9 family protein | PQ455_15270 | Q68FT1 | - | 3161889 - 3162548 | 24154.3 |
| dmt family transporter | PQ455_15275 | E1W9W8 | - | 3162576 - 3163505 | 32269.8 |
| alkene reductase | PQ455_15280 | P77258 | + | 3163588 - 3164661 | 37857.6 |
| hypothetical protein | PQ455_15285 | Not Available | + | 3164707 - 3165000 | 10415.5 |
| histidinol-phosphatase | PQ455_15290 | Q6NPM8 | - | 3165109 - 3165879 | 27150.2 |
| ribose-phosphate pyrophosphokinase | PQ455_15295 | Q0BPP0 | - | 3165881 - 3166816 | 33111.8 |
| duf2306 domain-containing protein | PQ455_15300 | P0AEJ1 | + | 3166942 - 3167451 | 18246.2 |
| glutamate--trna ligase | PQ455_15305 | A5V932 | + | 3167614 - 3168954 | 48065.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.