Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | PQ455_15210 | P50970 | - | 3151912 - 3153324 | 49937.6 |
| acyl-coa thioesterase | PQ455_15215 | O66120 | - | 3153350 - 3153754 | 14517.2 |
| hypothetical protein | PQ455_15220 | Not Available | - | 3153757 - 3154161 | 14256.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | PQ455_15225 | O66119 | - | 3154158 - 3155468 | 45508.8 |
| universal stress protein | PQ455_15230 | Not Available | + | 3155591 - 3156046 | 15714.1 |
| duf6356 family protein | PQ455_15235 | Not Available | + | 3156129 - 3156356 | 7955.56 |
| prolyl oligopeptidase family serine peptidase | PQ455_15240 | Q06903 | - | 3156437 - 3158560 | 76514.8 |
| response regulator | PQ455_15245 | A6X580 | - | 3158734 - 3159132 | 14248.3 |
| duf3572 domain-containing protein | PQ455_15250 | Not Available | + | 3159167 - 3159421 | 8734.36 |
| had family hydrolase | PQ455_15255 | Not Available | + | 3159418 - 3160038 | 22483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.