Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | PQ455_15160 | Q1GP98 | - | 3142390 - 3142698 | 11531.1 |
| elongation factor tu | PQ455_15165 | A5V604 | - | 3142824 - 3144014 | 42895.5 |
| elongation factor g | PQ455_15170 | Q1GP96 | - | 3144089 - 3146185 | 76800.8 |
| 30s ribosomal protein s7 | PQ455_15175 | A5V606 | - | 3146297 - 3146767 | 17674.3 |
| 30s ribosomal protein s12 | PQ455_15180 | Q2G8Y5 | - | 3146848 - 3147219 | 13936.2 |
| hypothetical protein | PQ455_15185 | Not Available | + | 3147218 - 3147370 | 5690.73 |
| glycosyltransferase | PQ455_15190 | Q8U4M3 | + | 3147556 - 3148692 | 40623.7 |
| hypothetical protein | PQ455_15195 | Not Available | + | 3148703 - 3150214 | 55687.7 |
| cation diffusion facilitator family transporter | PQ455_15200 | Q6DCE3 | - | 3150221 - 3151189 | 34035.3 |
| phosphatase pap2 family protein | PQ455_15205 | O34349 | - | 3151186 - 3151797 | 21144.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.